Structure of PDB 7obr Chain G Binding Site BS02
Receptor Information
>7obr Chain G (length=241) Species:
9986
(Oryctolagus cuniculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLK
VPPAINQFTQVLDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGK
GDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCR
KMGVPYCILKGKARLCRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTN
YNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG
Ligand information
>7obr Chain 8 (length=156) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuu
cgaacgcacuugcggccccggguuccucccggggcuacgccugucugagc
gucgcu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>.............>>>..)...>>
>....<<<..>>><<<<<<<<.......>>>>>>>>..............
......
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7obr
Molecular mechanism of cargo recognition and handover by the mammalian signal recognition particle.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
T52 W57 Y60 I61 Q64 R65 R67 R89 H159 D160 K185 R189
Binding residue
(residue number reindexed from 1)
T27 W32 Y35 I36 Q39 R40 R42 R64 H134 D135 K160 R164
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
Biological Process
GO:0000470
maturation of LSU-rRNA
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7obr
,
PDBe:7obr
,
PDBj:7obr
PDBsum
7obr
PubMed
34260909
UniProt
G1STW0
|RL7A_RABIT Large ribosomal subunit protein eL8 (Gene Name=RPL7A)
[
Back to BioLiP
]