Structure of PDB 7azg Chain G Binding Site BS02
Receptor Information
>7azg Chain G (length=362) Species:
1444266
(Escherichia coli 2-427-07_S4_C3) [
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HMKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDL
EMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLV
RSGRSRFSLSTLPAADFPNWQSEVEFTLPQATMKRLIEATQFSMAHQDVR
YYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIE
LMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNP
DKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEA
EEILDVTYSGMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAAS
QSAAYVVMPMRL
Ligand information
>7azg Chain O (length=6) Species:
32630
(synthetic construct) [
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GQFDLF
Receptor-Ligand Complex Structure
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PDB
7azg
Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
Resolution
2.92 Å
Binding residue
(original residue number in PDB)
T172 G174 H175 R176 V247 M362 P363 M364 R365
Binding residue
(residue number reindexed from 1)
T170 G172 H173 R174 V245 M358 P359 M360 R361
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0005515
protein binding
GO:0008408
3'-5' exonuclease activity
GO:0042802
identical protein binding
GO:0042803
protein homodimerization activity
Biological Process
GO:0006260
DNA replication
GO:0006261
DNA-templated DNA replication
GO:0006271
DNA strand elongation involved in DNA replication
GO:0006974
DNA damage response
GO:0030174
regulation of DNA-templated DNA replication initiation
GO:0032297
negative regulation of DNA-templated DNA replication initiation
GO:0042276
error-prone translesion synthesis
GO:0044787
bacterial-type DNA replication
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0009360
DNA polymerase III complex
GO:0030894
replisome
GO:1990078
replication inhibiting complex
GO:1990085
Hda-beta clamp complex
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7azg
,
PDBe:7azg
,
PDBj:7azg
PDBsum
7azg
PubMed
34806883
UniProt
P0A988
|DPO3B_ECOLI Beta sliding clamp (Gene Name=dnaN)
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