Structure of PDB 6xjd Chain G Binding Site BS02
Receptor Information
>6xjd Chain G (length=107) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLP
NIQAVLL
Ligand information
>6xjd Chain J (length=145) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
caggatgtatatatctgacacgtgcctggagactagggagtaatcccctt
ggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctag
agctgtctacgaccaattgagcggcctcggcaccgggattctcca
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6xjd
The molecular basis of tight nuclear tethering and inactivation of cGAS.
Resolution
6.8 Å
Binding residue
(original residue number in PDB)
A12 R17 R20 G28 R29 R32 R77
Binding residue
(residue number reindexed from 1)
A3 R8 R11 G19 R20 R23 R68
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0019899
enzyme binding
GO:0030527
structural constituent of chromatin
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0008150
biological_process
GO:0031507
heterochromatin formation
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6xjd
,
PDBe:6xjd
,
PDBj:6xjd
PDBsum
6xjd
PubMed
32911481
UniProt
P0C0S8
|H2A1_HUMAN Histone H2A type 1 (Gene Name=H2AC11)
[
Back to BioLiP
]