Structure of PDB 6vgn Chain G Binding Site BS02
Receptor Information
>6vgn Chain G (length=196) Species:
1773
(Mycobacterium tuberculosis) [
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ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAV
LLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLM
ETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLS
Ligand information
>6vgn Chain X (length=7) Species:
32630
(synthetic construct) [
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tFTPKAK
Receptor-Ligand Complex Structure
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PDB
6vgn
An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
E39 Y75 Q101 L105 M125 L127
Binding residue
(residue number reindexed from 1)
E25 Y61 Q87 L91 M111 L113
Enzymatic activity
Enzyme Commision number
3.4.21.92
: endopeptidase Clp.
Gene Ontology
Molecular Function
GO:0004176
ATP-dependent peptidase activity
GO:0004252
serine-type endopeptidase activity
GO:0005515
protein binding
GO:0008236
serine-type peptidase activity
GO:0051117
ATPase binding
Biological Process
GO:0006508
proteolysis
GO:0006515
protein quality control for misfolded or incompletely synthesized proteins
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005886
plasma membrane
GO:0009274
peptidoglycan-based cell wall
GO:0009368
endopeptidase Clp complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6vgn
,
PDBe:6vgn
,
PDBj:6vgn
PDBsum
6vgn
PubMed
32123115
UniProt
P9WPC3
|CLPP2_MYCTU ATP-dependent Clp protease proteolytic subunit 2 (Gene Name=clpP2)
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