Structure of PDB 6v7b Chain G Binding Site BS02

Receptor Information

>6v7b Chain G (length=119) Species: 1805492 (Pyrobaculum filamentous virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

IAETLTEKHTLGIEKVVATDSWRVGITSREKKLERINISAEISRRIQDEA
IAYARNKGIPYLPGINGIAWKLLRLKWLGYTDQINVVMRTVPAEWRDFLT
QIMENTQMESMYSELRKVR

Ligand information

>6v7b Chain 2 (length=323) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatat

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6v7b Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
Resolution	3.4 Å
Binding residue (original residue number in PDB)	L14 K17 H18 G21 V25 W31 I35 K41 R44 S48 G76 I77 W79 K126
Binding residue (residue number reindexed from 1)	L5 K8 H9 G12 V16 W22 I26 K32 R35 S39 G67 I68 W70 K117

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding

	Cellular Component
GO:0019029	helical viral capsid
GO:0044423	virion component

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Molecular Function

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Cellular Component

External links

PDB	RCSB:6v7b, PDBe:6v7b, PDBj:6v7b
PDBsum	6v7b
PubMed	32368353
UniProt	A0A140F3K6\|CAPS1_PFV1 Major capsid protein 1

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