Structure of PDB 6r6p Chain G Binding Site BS02

Receptor Information
>6r6p Chain G (length=241) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLK
VPPAINQFTQVLDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGK
GDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCR
KMGVPYCILKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTN
YNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG
Ligand information
>6r6p Chain 8 (length=156) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuu
cgaacgcacuugcggccccggguuccucccggggcuacgccugucugagc
gucgcu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>.............>>>..)...>>
>....<<<..>>><<<<<<<<.......>>>>>>>>..............
......
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6r6p Structural and mutational analysis of the ribosome-arresting human XBP1u.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		T52 W57 Y60 I61 Q64 R65 R89 H159 D160 K185 R189
Binding residue
(residue number reindexed from 1)		T27 W32 Y35 I36 Q39 R40 R64 H134 D135 K160 R164
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0042254 ribosome biogenesis
Cellular Component
GO:1990904 ribonucleoprotein complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6r6p, PDBe:6r6p, PDBj:6r6p
PDBsum6r6p
PubMed31246176
UniProtG1STW0|RL7A_RABIT Large ribosomal subunit protein eL8 (Gene Name=RPL7A)

[Back to BioLiP]