Structure of PDB 6ftl Chain G Binding Site BS02

Receptor Information
>6ftl Chain G (length=482) Species: 267567 (Skeletonema marinoi) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QSVSERTRIKSDRYESGVIPYAKMGYWDASYTVKDTDVLALFRITPQPGV
DPVEAAAAVAGESSTATWTVVWTDLLTACERYRAKAYRVDPVPNSADVFF
AFIAYECDLFEEASLANLTASIIGNVFGFKAVSALRLEDMRIPHSYLKTF
QGPATGIIVERERLNKYGTPLLGATVKPKLGLSGKNYGRVVYEGLKGGLD
FLKDDENINSQPFMRWRERFLNCMEGINRASAATGEVKGSYLNITAATME
EVYKRAEYAKAVGSIVVMIDLVMGYTAIQSIAYWARENDMLLHLHRAGNS
TYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMIKGFYDIL
RLTELEVNLPFGIFFEMDWASLRRCMPVASGGIHCGQMHQLIHYLGDDVV
LQFGGGTIGHPDGIQAGATANRVALESMVLARNEGVDYFDQQVGPQILRD
AAKTCGPLQTALDLWKDISFDYTSTDTADFAE
Ligand information
Ligand IDCAP
InChIInChI=1S/C6H14O13P2/c7-3(1-18-20(12,13)14)4(8)6(11,5(9)10)2-19-21(15,16)17/h3-4,7-8,11H,1-2H2,(H,9,10)(H2,12,13,14)(H2,15,16,17)/t3-,4-,6-/m1/s1
InChIKeyITHCSGCUQDMYAI-ZMIZWQJLSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C(C(C(COP(=O)(O)O)(C(=O)O)O)O)O)OP(=O)(O)O
CACTVS 3.341O[CH](CO[P](O)(O)=O)[CH](O)[C](O)(CO[P](O)(O)=O)C(O)=O
ACDLabs 10.04O=P(O)(O)OCC(O)C(O)C(O)(C(=O)O)COP(=O)(O)O
OpenEye OEToolkits 1.5.0C([C@H]([C@H]([C@](COP(=O)(O)O)(C(=O)O)O)O)O)OP(=O)(O)O
CACTVS 3.341O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@](O)(CO[P](O)(O)=O)C(O)=O
FormulaC6 H14 O13 P2
Name2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
ChEMBL
DrugBank
ZINC
PDB chain6ftl Chain G Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6ftl Structural and functional analyses of Rubisco from arctic diatom species reveal unusual posttranslational modifications.
Resolution2.6 Å
Binding residue
(original residue number in PDB)		T177 K179 K205 E208 H297 R298 H330 K337 L338 S382 G383 G406
Binding residue
(residue number reindexed from 1)		T175 K177 K203 E206 H295 R296 H328 K335 L336 S380 G381 G404
Annotation score2
Enzymatic activity
Enzyme Commision number 4.1.1.39: ribulose-bisphosphate carboxylase.
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004497 monooxygenase activity
GO:0016829 lyase activity
GO:0016984 ribulose-bisphosphate carboxylase activity
GO:0046872 metal ion binding
Biological Process
GO:0015977 carbon fixation
GO:0019253 reductive pentose-phosphate cycle
Cellular Component
GO:0009536 plastid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ftl, PDBe:6ftl, PDBj:6ftl
PDBsum6ftl
PubMed29925588
UniProtA0A3B6UEX0

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