Structure of PDB 5zol Chain G Binding Site BS02
Receptor Information
>5zol Chain G (length=222) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RSMELYLDTSDVVAVKALSRIFPLAGVTTNPSTIAAGKKPLDVVLPQLHE
AMGGQGRLFATVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKM
LKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTD
LHQLLKMHAPQAKVLAASFKTPRQALDCLLAGCESITLPLDVAQQMQSYP
AVDAAVAKFEQDWQGAFGRTSI
Ligand information
Ligand ID
LW1
InChI
InChI=1S/C5H4OS/c6-4-5-2-1-3-7-5/h1-4H
InChIKey
CNUDBTRUORMMPA-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
O=Cc1sccc1
ACDLabs 12.01
C(c1cccs1)=O
OpenEye OEToolkits 2.0.6
c1cc(sc1)C=O
Formula
C5 H4 O S
Name
thiophene-2-carbaldehyde
ChEMBL
CHEMBL328441
DrugBank
ZINC
ZINC000000158751
PDB chain
5zol Chain G Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5zol
The engineering of decameric d-fructose-6-phosphate aldolase A by combinatorial modulation of inter- and intra-subunit interactions.
Resolution
2.172 Å
Binding residue
(original residue number in PDB)
D6 R134 S166
Binding residue
(residue number reindexed from 1)
D8 R136 S168
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
P170 R171
Catalytic site (residue number reindexed from 1)
P172 R173
Enzyme Commision number
4.1.2.-
Gene Ontology
Molecular Function
GO:0016829
lyase activity
GO:0016832
aldehyde-lyase activity
GO:0042802
identical protein binding
GO:0097023
fructose 6-phosphate aldolase activity
Biological Process
GO:0005975
carbohydrate metabolic process
GO:0006000
fructose metabolic process
GO:0042182
ketone catabolic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5zol
,
PDBe:5zol
,
PDBj:5zol
PDBsum
5zol
PubMed
32519699
UniProt
P78055
|FSAA_ECOLI Fructose-6-phosphate aldolase 1 (Gene Name=fsaA)
[
Back to BioLiP
]