Structure of PDB 5w7g Chain G Binding Site BS02

Receptor Information
>5w7g Chain G (length=131) Species: 235266 (Captovirus AFV1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RKLRQDSTDRYKTKLYLWRNLGGLIPEDMAISVTESITADWKQYNDMMSK
VRNETLDILKTNKVATEDYIGYIAFAEELAHQVWKNKNSSPDPNTANEAS
KTDLESKYSDVYGLDVTVLDAIYNAVIPIIM
Ligand information
>5w7g Chain r (length=252) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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Receptor-Ligand Complex Structure
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PDB5w7g Model for a novel membrane envelope in a filamentous hyperthermophilic virus.
Resolution4.5 Å
Binding residue
(original residue number in PDB)
L8 S12 R15 Y16 K19 Y49 M53 T71 I75 K90
Binding residue
(residue number reindexed from 1)
L3 S7 R10 Y11 K14 Y44 M48 T66 I70 K85
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

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Molecular Function

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Cellular Component
External links
PDB RCSB:5w7g, PDBe:5w7g, PDBj:5w7g
PDBsum5w7g
PubMed28639939
UniProtQ70LC6|CAPS1_AFV1Y Major capsid protein 1 (Gene Name=ORF140)

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