Structure of PDB 5g4v Chain G Binding Site BS02
Receptor Information
>5g4v Chain G (length=117) Species:
2234
(Archaeoglobus fulgidus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SYVRFEVPEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIA
EDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAIINE
GELRKELGSLVEKIKGL
Ligand information
>5g4v Chain F (length=19) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggcgaagagccggcgagcc
...................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5g4v
A Quasi-Cyclic RNA Nano-Scale Molecular Object Constructed Using Kink Turns.
Resolution
2.87 Å
Binding residue
(original residue number in PDB)
E34 K37 R41
Binding residue
(residue number reindexed from 1)
E34 K37 R41
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0004526
ribonuclease P activity
GO:0019843
rRNA binding
Biological Process
GO:0001682
tRNA 5'-leader removal
GO:0006412
translation
GO:0008033
tRNA processing
GO:0042254
ribosome biogenesis
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5g4v
,
PDBe:5g4v
,
PDBj:5g4v
PDBsum
5g4v
PubMed
27506301
UniProt
O29494
|RL7A_ARCFU Large ribosomal subunit protein eL8 (Gene Name=rpl7ae)
[
Back to BioLiP
]