Structure of PDB 5elb Chain G Binding Site BS02

Receptor Information

>5elb Chain G (length=103) Species: 127906 (Vibrio cholerae O1)

TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQV
EVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAIS
MAN

Ligand information

• Ligand ID: GLA
• InChI: InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6+/m1/s1
• InChIKey: WQZGKKKJIJFFOK-PHYPRBDBSA-N
• SMILES:
  CACTVS 3.341: OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@H]1O
  OpenEye OEToolkits 1.5.0: C(C1C(C(C(C(O1)O)O)O)O)O
  OpenEye OEToolkits 1.5.0: C([C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
  CACTVS 3.341: OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
  ACDLabs 10.04: OC1C(O)C(OC(O)C1O)CO
• Formula: C6 H12 O6
• Name: alpha-D-galactopyranose;
  alpha-D-galactose;
  D-galactose;
  galactose;
  ALPHA D-GALACTOSE
• ChEMBL: CHEMBL1233058
• ZINC: ZINC000000901155
• PDB chain: 5elb Chain G Residue 202

Receptor-Ligand Complex Structure

Structure summary

• PDB: 5elb High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence.
• Resolution: 1.08 Å
• Binding residue (original residue number in PDB): E51 Q56 H57 Q61 W88 N90 K91
• Binding residue (residue number reindexed from 1): E51 Q56 H57 Q61 W88 N90 K91
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0046872 metal ion binding

Cellular Component

• GO:0005576 extracellular region

External links

• PDB: RCSB:5elb, PDBe:5elb, PDBj:5elb
• PDBsum: 5elb
• PubMed: 27082955
• UniProt: Q57193