Structure of PDB 3n7u Chain G Binding Site BS02
Receptor Information
>3n7u Chain G (length=351) Species:
3702
(Arabidopsis thaliana) [
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DSKKIVGVFYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKE
GPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHI
DLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEW
NVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAP
ELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGV
LIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQ
AMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAPQY
R
Ligand information
Ligand ID
AZI
InChI
InChI=1S/N3/c1-3-2/q-1
InChIKey
IVRMZWNICZWHMI-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[N-]=[N+]=[N-]
Formula
N3
Name
AZIDE ION
ChEMBL
CHEMBL79455
DrugBank
ZINC
PDB chain
3n7u Chain G Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
3n7u
Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
P97 F98 I122 R284 H332
Binding residue
(residue number reindexed from 1)
P70 F71 I95 R257 H305
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
N146 R284 D308 Q313 H332
Catalytic site (residue number reindexed from 1)
N119 R257 D281 Q286 H305
Enzyme Commision number
1.17.1.9
: formate dehydrogenase.
Gene Ontology
Molecular Function
GO:0008863
formate dehydrogenase (NAD+) activity
GO:0016491
oxidoreductase activity
GO:0016616
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287
NAD binding
Biological Process
GO:0042183
formate catabolic process
Cellular Component
GO:0005739
mitochondrion
GO:0005829
cytosol
GO:0009507
chloroplast
GO:0009536
plastid
GO:0009579
thylakoid
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3n7u
,
PDBe:3n7u
,
PDBj:3n7u
PDBsum
3n7u
PubMed
UniProt
Q9S7E4
|FDH_ARATH Formate dehydrogenase, chloroplastic/mitochondrial (Gene Name=FDH1)
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