Structure of PDB 2grj Chain G Binding Site BS02
Receptor Information
>2grj Chain G (length=179) Species:
2336
(Thermotoga maritima) [
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HHHMVIGVTGKIGTGKSTVCEILKNKYGAHVVNVDRIGHEVLEEVKEKLV
ELFGGSVLEDGKVNRKKLAGIVFESRENLKKLELLVHPLMKKRVQEIINK
TSGLIVIEAALLKRMGLDQLCDHVITVVASRETILKRNREADRRLKFQED
IVPQGIVVANNSTLEDLEKKVEEVMKLVW
Ligand information
Ligand ID
COD
InChI
InChI=1S/C21H35N7O13P2S/c1-21(2,16(32)19(33)24-4-3-12(29)23-5-6-44)8-39-43(36,37)41-42(34,35)38-7-11-14(30)15(31)20(40-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-32,44H,3-8H2,1-2H3,(H,23,29)(H,24,33)(H,34,35)(H,36,37)(H2,22,25,26)/t11-,14-,15-,16+,20-/m1/s1
InChIKey
KDTSHFARGAKYJN-IBOSZNHHSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
CC(C)(CO[P@@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)[C@H](C(=O)NCCC(=O)NCCS)O
CACTVS 3.341
CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCS
CACTVS 3.341
CC(C)(CO[P@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCS
OpenEye OEToolkits 1.5.0
CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)C(C(=O)NCCC(=O)NCCS)O
ACDLabs 10.04
O=C(NCCS)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
Formula
C21 H35 N7 O13 P2 S
Name
DEPHOSPHO COENZYME A
ChEMBL
DrugBank
DB03170
ZINC
ZINC000008551261
PDB chain
2grj Chain G Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
2grj
Crystal structure of Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase) (tm1387) from THERMOTOGA MARITIMA at 2.60 A resolution
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
D32 H36 R62 F70 L79 H84 L108 R141 Q145
Binding residue
(residue number reindexed from 1)
D35 H39 R65 F73 L82 H87 L111 R144 Q148
Annotation score
3
Enzymatic activity
Enzyme Commision number
2.7.1.24
: dephospho-CoA kinase.
Gene Ontology
Molecular Function
GO:0004140
dephospho-CoA kinase activity
GO:0005524
ATP binding
GO:0016301
kinase activity
Biological Process
GO:0015937
coenzyme A biosynthetic process
GO:0016310
phosphorylation
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2grj
,
PDBe:2grj
,
PDBj:2grj
PDBsum
2grj
PubMed
UniProt
Q9X1A7
|COAE_THEMA Dephospho-CoA kinase (Gene Name=coaE)
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