Structure of PDB 1id3 Chain G Binding Site BS02
Receptor Information
>1id3 Chain G (length=108) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAE
ILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNI
HQNLLPKK
Ligand information
>1id3 Chain J (length=146) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagcggaattccgctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1id3
Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
R18 R30 R33 R43 R78
Binding residue
(residue number reindexed from 1)
R6 R18 R21 R31 R66
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0000122
negative regulation of transcription by RNA polymerase II
GO:0006281
DNA repair
GO:0006325
chromatin organization
GO:0031507
heterochromatin formation
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
GO:0031298
replication fork protection complex
GO:0032991
protein-containing complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1id3
,
PDBe:1id3
,
PDBj:1id3
PDBsum
1id3
PubMed
11566884
UniProt
P04911
|H2A1_YEAST Histone H2A.1 (Gene Name=HTA1)
[
Back to BioLiP
]