Structure of PDB 6sga Chain F3 Binding Site BS02

Receptor Information
>6sga Chain F3 (length=888) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PRRIPGTTKVTYTNKKGRTFSFSVPVSELTHPQVTLESAAGTWREMDTSF
CELGDIEDDMPSPVDECLRGGSSLDKRLIQEVRERFVSFCREYVLMDTSG
MKSTILSTELNAGPDYEHYDRRLRRKRHWLAIRHRFEDVRYVIWPDVVNP
SLTAGEMLEALLWLDAASTFCVRKVHPSDLGDKSEFLPLDLQREVEVVAC
HARRDLDFFDPSATSLEQFTACAALCVNHRVPFSLFFPAQDVCGDASVST
GQCIVANAPSPHTALGAVRIMALISEGSGSDIGKTIMFSDAFGAVTRFGI
LRGLSRVMSVEAFGCKDALENVNESELCIILHFCAEVREQNAAFFRRYEA
SEEDSDPQQVSFLAKYQQLSQIALARCKRLLYHPDSPRAQVMSEDGYIPL
VELQRHAEGTNKAALIHYNLGIRSAQGMRRVALGAQSSARLAELVSRLEE
ASARVSGNTLVNDLVHHLSHKAAAGKMSLTLREVNTLLPLLSRMRRESPN
GALDARFDRVFNAIDTAIGAAMRHNCTLDELLDLAEGLAACEMVPSALKQ
VEMVLIRSVMMHECSPMHLRRMLQAMFTLMRTSVPQVLLQSVASRVADYI
KEASHMNHEECEQLLELLVVLGKCGYGALPGLVTIYWEAQLIDSMQLNPR
LRCSYASLLASAAFALKKHDKRAWEGLADESHRLFMEYTRCNKENDIGRF
AECVTGLAVLTQIKDNTNSSDVAFLKEYLSATSLELKSCEVIRVQELTDL
LGRTLEWSEALGVVAPDVVIQLEKALFVMLENVSHTAPGVGIPDELVTAA
CCLVDMSSASLELRKAAAGVVGGAIVHAEEALETLRSGAPTQVRPGHSFD
VAALASAERENVYKNSILQYCAALQRSGMSTHVEELWS
Ligand information
>6sga Chain CA (length=463) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaagugcug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauagaaauuaaaaagcacc
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...........................<<<<......<<<........<.
..>..........<<<.............................<....
.<<...<<<.......>>>..>>........>........<<....>>..
...>>>...........................................>
>>.........................<<<..<<.........>>....>
>>..........>>>>.......<<.<<........<<<<..........
.......>>>>..................<<<<<<<........<<<...
.>>>....>>>>>>>....>>.>>....<<.......>>.......<<<.
...<<<<......>>>>....>>>........<<<<<<<<<....>>>>>
>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		K150 T152 H166 R169 R170 R173 F234 R237 K238 H481 G491 M492 R493 Q500
Binding residue
(residue number reindexed from 1)		K102 T104 H118 R121 R122 R125 F170 R173 K174 H417 G427 M428 R429 Q436
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6sga, PDBe:6sga, PDBj:6sga
PDBsum6sga
PubMed31515389
UniProtQ38E61

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