Structure of PDB 8ydb Chain F Binding Site BS02
Receptor Information
>8ydb Chain F (length=323) Species:
2053611
(Selenomonas sp.) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TLKSRPENLSFARCLNTTEAKFWQTDFLKRHTFKLPLLITDKAVLASKGH
EMPPDKLEKEIMDPNPQKSQSCTLSTECDTLRIDFGIKVLPVKESMYSCS
DYNYRTAIYQKIDEYIAEDGFLTLAKRYVNNIANARFLWRNRKGAEIIET
IVTIEDKEYPSFNSKSFNLDTFVEDNATINEIAQQIADTFAGKREYLNIY
VTCFVKIGCAMEVYPSQEMTFDDDDKGKKLFKFEGSAGMHSQKINNALRT
IDTWYPDYTTYEFPIPVENYGAARSIGIPFRPDTKSFYKLIDRMILKNED
LPIEDKHYVMAILIRGGMFSKKQ
Ligand information
>8ydb Chain T (length=32) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gtggccttattaaatgacttctccgctaatac
................................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8ydb
Mechanisms for HNH-mediated target DNA cleavage in type I CRISPR-Cas systems
Resolution
3.4 Å
Binding residue
(original residue number in PDB)
A56 S57 K58 H60 Q77 M328
Binding residue
(residue number reindexed from 1)
A46 S47 K48 H50 Q67 M318
External links
PDB
RCSB:8ydb
,
PDBe:8ydb
,
PDBj:8ydb
PDBsum
8ydb
PubMed
39047725
[
Back to BioLiP
]
