Structure of PDB 8qbl Chain F Binding Site BS02

Receptor Information
>8qbl Chain F (length=302) Species: 469008 (Escherichia coli BL21(DE3)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKFTDEQQQQLIGHLTKKGFYRGANIKITIFLCGGDVANHQSWRHQLSQF
LAKFSDVDIFYPEDLFDDLLAGQGQHSLLSLENILAEAVDVIILFPESPG
SFTALGAFSNNENLRRKLICIQDAKFKSKRSFINYGPVRLLRKFNSKSVL
RCSSNELKEMCDSSIDVARKLRLYKKLMASIKKVRKENKVSKDIGNILYA
ERFLLPCIYLLDSVNYRTLCELAFKAIKQDDVLSKIIVRSVVSRLINERK
ILQMTDGYQVTALGASYVRSVFDRKTLDRLRLEIMNFENRRKSTFNYDKI
PY
Ligand information
>8qbl Chain V (length=85) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gtcagaaaaaacgggtttcctggttggctcggagagcatcaggcgatgct
ctccgttccaacaaggaaaacagacagtaactcag
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qbl Retron-Eco1 assembles NAD + -hydrolyzing filaments that provide immunity against bacteriophages.
Resolution2.66 Å
Binding residue
(original residue number in PDB)		R276 K277 S295 T296 Y304
Binding residue
(residue number reindexed from 1)		R274 K275 S293 T294 Y302
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Biological Process
External links
PDB RCSB:8qbl, PDBe:8qbl, PDBj:8qbl
PDBsum8qbl
PubMed38788717
UniProtP0DV88|RIB86_ECOLX Retron Ec86 putative ribosyltransferase/DNA-binding protein (Gene Name=LM2_00875)

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