Structure of PDB 8ek8 Chain F Binding Site BS02
Receptor Information
>8ek8 Chain F (length=90) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKG
NRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLG
Ligand information
>8ek8 Chain D (length=15) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cccttctccttttat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8ek8
DNA selection by the master transcription factor PU.1.
Resolution
2.63 Å
Binding residue
(original residue number in PDB)
R171 L172 W213 K217 N219 K221 M223 K227 Y235 K247
Binding residue
(residue number reindexed from 1)
R3 L4 W45 K49 N51 K53 M55 K59 Y67 K79
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8ek8
,
PDBe:8ek8
,
PDBj:8ek8
PDBsum
8ek8
PubMed
37352101
UniProt
P17947
|SPI1_HUMAN Transcription factor PU.1 (Gene Name=SPI1)
[
Back to BioLiP
]