Structure of PDB 8dej Chain F Binding Site BS02
Receptor Information
>8dej Chain F (length=286) Species:
882
(Nitratidesulfovibrio vulgaris str. Hildenborough) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVE
DAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQ
EVSITRMAVTTKAEAEDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSD
EDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDL
VKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
Ligand information
>8dej Chain N (length=48) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aagagtggcgcgcactcgccagcctgagcatggcgaaaactcctccag
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8dej
Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Resolution
2.86 Å
Binding residue
(original residue number in PDB)
K93 T125 E126 R173 M175 G176 R177
Binding residue
(residue number reindexed from 1)
K93 T125 E126 R169 M171 G172 R173
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0043571
maintenance of CRISPR repeat elements
View graph for
Biological Process
External links
PDB
RCSB:8dej
,
PDBe:8dej
,
PDBj:8dej
PDBsum
8dej
PubMed
36805026
UniProt
Q72WF7
[
Back to BioLiP
]