Structure of PDB 7vpd Chain F Binding Site BS02
Receptor Information
>7vpd Chain F (length=301) Species:
100226
(Streptomyces coelicolor A3(2)) [
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ATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEDKLANSDKLAPK
LKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNL
GLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTP
LGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVS
MRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDY
L
Ligand information
>7vpd Chain P (length=84) [
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ggcgacccggcgcccgctacggagtcaactacgggtagggggtatcgggc
aacgcggcactgaacaccgttgtcatgtgccttg
Receptor-Ligand Complex Structure
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PDB
7vpd
Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Resolution
3.77 Å
Binding residue
(original residue number in PDB)
R292 R296 R364 R367 G411 E412 D413 L472 D473 R483 E484 R487
Binding residue
(residue number reindexed from 1)
R83 R87 R155 R158 G202 E203 D204 L263 D264 R274 E275 R278
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0016987
sigma factor activity
Biological Process
GO:0006352
DNA-templated transcription initiation
GO:0006355
regulation of DNA-templated transcription
GO:0010468
regulation of gene expression
GO:2000142
regulation of DNA-templated transcription initiation
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7vpd
,
PDBe:7vpd
,
PDBj:7vpd
PDBsum
7vpd
PubMed
35871291
UniProt
A0A7U9DYK1
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