Structure of PDB 7dlk Chain F Binding Site BS02
Receptor Information
>7dlk Chain F (length=360) Species:
1423
(Bacillus subtilis) [
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EQIVPFYGKHQAGITTAHQTYVYFAALDVTAKEKSDIITLFRNWTSLTQM
LTSGKKMSAEQRNQYLPPQDTGESADLSPSNLTVTFGFGPSFFEKDGKDR
FGLKSKKPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVAFHALRNL
LNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKDGTGNQSTEDDSLMNS
IVWVQSGEPDWMTGGTYMAFRKIKMFLEIWDRSSLKDQEDTFGRRKSSGA
PFGQKKETDPVKLNQIPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGYM
DAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACPGGCKK
GEYIAQRLLE
Ligand information
Ligand ID
OXY
InChI
InChI=1S/O2/c1-2
InChIKey
MYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
O=O
Formula
O2
Name
OXYGEN MOLECULE
ChEMBL
CHEMBL1234886
DrugBank
DB09140
ZINC
PDB chain
7dlk Chain F Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
7dlk
Structure of dye-decolorizing peroxidase from Bacillus subtilis in complex with veratryl alcohol.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
D187 R286 F308
Binding residue
(residue number reindexed from 1)
D185 R284 F306
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.11.1.-
4.98.1.1
: protoporphyrin ferrochelatase.
Gene Ontology
Molecular Function
GO:0004325
ferrochelatase activity
GO:0004601
peroxidase activity
GO:0016829
lyase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0033212
iron import into cell
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005576
extracellular region
GO:0005829
cytosol
GO:0005886
plasma membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7dlk
,
PDBe:7dlk
,
PDBj:7dlk
PDBsum
7dlk
PubMed
34687768
UniProt
P39597
|EFEB_BACSU Deferrochelatase (Gene Name=efeB)
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