Structure of PDB 7bl2 Chain F Binding Site BS02
Receptor Information
>7bl2 Chain F (length=177) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFR
Ligand information
>7bl2 Chain B (length=119) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacuca
gaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgag
aguagggaacugccaggca
.<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>
>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>...
....>>...>>>>>>>>>.
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7bl2
Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Resolution
3.7 Å
Binding residue
(original residue number in PDB)
S23 M25 Q26 K32 Q62 K63 L65 I66 K68 T89 R91
Binding residue
(residue number reindexed from 1)
S23 M25 Q26 K32 Q62 K63 L65 I66 K68 T89 R91
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0008097
5S rRNA binding
GO:0019843
rRNA binding
Biological Process
GO:0000027
ribosomal large subunit assembly
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7bl2
,
PDBe:7bl2
,
PDBj:7bl2
PDBsum
7bl2
PubMed
33639093
UniProt
P62399
|RL5_ECOLI Large ribosomal subunit protein uL5 (Gene Name=rplE)
[
Back to BioLiP
]