Structure of PDB 5zla Chain F Binding Site BS02

Receptor Information
>5zla Chain F (length=436) Species: 452863 (Pseudarthrobacter chlorophenolicus A6) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NNRYDVTEWPAGNPAKDIGEVINSIIADIKARQGAADVDDGGKPGAVIYL
PPGDYHLRTQVLIDISFLRIEGSGHGFTSSSIRFNVPEEEWPDLHELWPG
GSRVIVDLPADSAAGAAFLVAREGSPRISSVEFSNFCIDGLHFTADGSGR
HPENTYANGKTGIHVASANDSFRVTDMGFVYLENALTIHKADALSIHHNF
IAECGSCIELRGWGQASKITDNLVGAGPRGHSIYAENHGGLLVTANNVFP
RGASSVHFKGVTRSSVTNNRLHAFYPGMVRLEENSSENLVATNHFLRDHE
PWTPFFGVDNGLDDLTGLLSISGNNNSVIGNHFSEVVDANEIRPEGATPV
IIRLTAGTGNFVSTNHVVAMDVDAASSDSAFEAQVDALLATEAADLAVTA
VLVDPGSARNTILDSGSDTQVVADRAVNAIRATPTV
Ligand information
Ligand ID9F3
InChIInChI=1S/C12H20O10/c13-1-5-7(16)9(18)12(21-5)4-19-11(3-15)10(22-12)8(17)6(2-14)20-11/h5-10,13-18H,1-4H2/t5-,6-,7-,8-,9+,10+,11-,12-/m1/s1
InChIKeyKSRQDWNGXKYIDO-TWOHWVPZSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.6C1[C@]2([C@H]([C@@H]([C@H](O2)CO)O)O)O[C@H]3[C@@H]([C@H](O[C@]3(O1)CO)CO)O
OpenEye OEToolkits 2.0.6C1C2(C(C(C(O2)CO)O)O)OC3C(C(OC3(O1)CO)CO)O
CACTVS 3.385OC[CH]1O[C]2(CO[C]3(CO)O[CH](CO)[CH](O)[CH]3O2)[CH](O)[CH]1O
CACTVS 3.385OC[C@H]1O[C@@]2(CO[C@]3(CO)O[C@H](CO)[C@@H](O)[C@@H]3O2)[C@@H](O)[C@@H]1O
FormulaC12 H20 O10
Name(2R,3'S,4'S,4aR,5'R,6R,7R,7aS)-4a,5',6-tris(hydroxymethyl)spiro[3,6,7,7a-tetrahydrofuro[2,3-b][1,4]dioxine-2,2'-oxolane ]-3',4',7-triol;
Beta-2,1'-alpha-2',3-Difructofuranose anhydride
ChEMBL
DrugBank
ZINCZINC000005426437
PDB chain5zla Chain F Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5zla Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Resolution1.7 Å
Binding residue
(original residue number in PDB)
S84 E210 F256 P257 R258 F281 W309
Binding residue
(residue number reindexed from 1)
S81 E203 F249 P250 R251 F274 W302
Annotation score1
Enzymatic activity
Enzyme Commision number 4.2.2.17: inulin fructotransferase (DFA-I-forming).
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016829 lyase activity
GO:0033997 inulin fructotransferase (DFA-I-forming) activity

View graph for
Molecular Function
External links
PDB RCSB:5zla, PDBe:5zla, PDBj:5zla
PDBsum5zla
PubMed
UniProtB8HDZ1

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