Structure of PDB 5oql Chain F Binding Site BS02

Receptor Information
>5oql Chain F (length=429) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KAELDRIRRYKQAQKKYGRGPRVDIKKLRRTLTNLENKYKTAALKAKEAE
ILLENQTGFLEPEGELERTYKVRQDEIVKEVAVEVAQKKFELKLTELGPY
TCEYSRNGRDLILAGRKGHVATMDWREGKLGCELQLGETVRDARFLHNNQ
FFAVAQKKYVYIYDHNGVEIHCLRKHVEVSHMEFLPYHFLLATLSISGQL
KYQDTSTGQIVAEIATKHGTPVSLTQNPYNAILHIGQQNGTVTLWSPNST
DPLVKLLAHRGPVRSLAVDREGRYMVSTGQDNKMCIWDIRNFKEAVNSYF
TRAPATSVAISDTGLTAVGWGTHTTIWKGLFNKERPVQVKVDSPYMTWGG
QGQVVERVRWCPFEDILGIGHNEGFSSIIVPGAGEANYDALEVNPFETKK
QRQEGEVKALLNKLQPEMIALDPNFIGNL
Ligand information
>5oql Chain 2 (length=230) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccauuuacucucgcucuaccugcaaagguggcggucg
cgugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgc
ggggugggugucgauggaagucugaccggc
..................................................
..........................<<<<..............<<<<<<
<<<<.<<............<<<<<<...<<<<<<....>>>>>><<<<<<
<<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..
>>>>>>.>>>>>>>.>>>.......>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5oql 3.2- angstrom -resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		N206 L431 K440 K453
Binding residue
(residue number reindexed from 1)		N166 L391 K400 K413
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005730 nucleolus
GO:0030686 90S preribosome
GO:0032040 small-subunit processome

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5oql, PDBe:5oql, PDBj:5oql
PDBsum5oql
PubMed28967883
UniProtG0RZ99

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