Structure of PDB 1rb8 Chain F Binding Site BS02

Receptor Information

>1rb8 Chain F (length=422) Species: 10849 (Escherichia phage alpha3) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

REIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGALRLSPLRRGL
AIDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNRYPDHAGY
VGTIVPANNRIPKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARY
GFRCCHLKNIWSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQER
TYFMQRYRDVISSFGGSTSYDADNRPLLVMHTDFWASGYDVDGTDQSSLG
QFSGRVQQTFKHSVPRFFVPEHGVMMTLALIRFPPISPLEHHYLAGKSQL
TYTDLAGDPALIGNLPPREISYRDLFRDGRSGIKIKVAESIWYRTHPDYV
NFKYHDLHGFPFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNK
QARYNVSVYRHMPTVRDSIMTS

Ligand information

>1rb8 Chain X (length=4) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

caaa

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1rb8 The phiX174 Protein J Mediates DNA Packaging and Viral Attachment to Host Cells.
Resolution	3.5 Å
Binding residue (original residue number in PDB)	E208 F212
Binding residue (residue number reindexed from 1)	E199 F203

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005198	structural molecule activity

	Biological Process
GO:0046718	symbiont entry into host cell

	Cellular Component
GO:0039615	T=1 icosahedral viral capsid

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Molecular Function

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Cellular Component

External links

PDB	RCSB:1rb8, PDBe:1rb8, PDBj:1rb8
PDBsum	1rb8
PubMed	15046981
UniProt	P08767\|CAPSD_BPAL3 Capsid protein F (Gene Name=F)

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