Structure of PDB 1r4p Chain F Binding Site BS02

Receptor Information
>1r4p Chain F (length=70) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLQSAQLTGMTVT
IKSSTCESGSGFAEVQFNND
Ligand information
Ligand IDFMT
InChIInChI=1S/CH2O2/c2-1-3/h1H,(H,2,3)
InChIKeyBDAGIHXWWSANSR-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(=O)O
CACTVS 3.352OC=O
ACDLabs 11.02O=CO
FormulaC H2 O2
NameFORMIC ACID
ChEMBLCHEMBL116736
DrugBankDB01942
ZINC
PDB chain1r4p Chain F Residue 3011 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1r4p Structure of Shiga Toxin Type 2 (Stx2) from Escherichia coli O157:H7.
Resolution1.77 Å
Binding residue
(original residue number in PDB)		E9 Q43
Binding residue
(residue number reindexed from 1)		E9 Q43
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0019836 hemolysis by symbiont of host erythrocytes
GO:0098676 modulation of host virulence by virus
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1r4p, PDBe:1r4p, PDBj:1r4p
PDBsum1r4p
PubMed15075327
UniProtP09386|STXB_BP933 Shiga-like toxin 2 subunit B (Gene Name=stxB2)

[Back to BioLiP]