Structure of PDB 8ipa Chain EB Binding Site BS02

Receptor Information
>8ipa Chain EB (length=399) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TARPLVSVKALDGDMATDAAGVPMPHVMKAPIRPDVITFVHRLVSCNSRQ
PYAVSRKAGHQTSAESWGTGRAVSRIPRVGGGGTHRAGQGAFGNMCRGGR
MFAPTRIWRKWHRRVNVRLRRVAVASALAATAVPAIVTARGHRIESVPEF
PLVVSDSAEGIEKTAQAIKVLKQLGAYADAEKAKDSVGIRPGKGKMRNRR
YINRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRF
VIWTESAFKKLDEVYGSFEASSSKKKGFVLPRPKMTNADLGRLINSDEVQ
SVVKPINKEVKRREARKNPLKNAAAVLKLNPYFGTARRMAVLAEAARVKA
RKEKINSKRTKLSAEEASKIKAAGKAWYQTMISDSDYTEFDVFSKWLGV
Ligand information
>8ipa Chain SB (length=160) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cgacucucggcaacggauaucucggcucucgcaucgaugaagaacguagc
gaaaugcgauaccuggugugaauugcagaaucccgugaaccaucgagucu
uugaacgcaaguugcgcccgaggccauccggccgagggcacgccugccug
ggcgucacgc
.........................................<<<<<<.((
.....>>>....<<<<<<<.....))............>.>>>>.>>..>
>>....<<.....>><<<<..<<<<....>>>>..>>>>...........
..........
Receptor-Ligand Complex Structure
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PDB8ipa Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Resolution3.4 Å
Binding residue
(original residue number in PDB)		P54 A56 S58 K198
Binding residue
(residue number reindexed from 1)		P51 A53 S55 K195
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ipa, PDBe:8ipa, PDBj:8ipa
PDBsum8ipa
PubMed38267667
UniProtA0A3B5ZXX7

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