Structure of PDB 8v25 Chain E Binding Site BS02

Receptor Information
>8v25 Chain E (length=99) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
SAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Ligand information
>8v25 Chain J (length=145) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tcggatgtatatatctgacacgtgcctggagactagggagtaatcccctt
ggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctag
agctgtctacgaccaattgagcggcctcggcaccgggattctcga
Receptor-Ligand Complex Structure
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PDB8v25 Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Resolution3.32 Å
Binding residue
(original residue number in PDB)
Y41 R42 R72 T118
Binding residue
(residue number reindexed from 1)
Y5 R6 R36 T82
External links
PDB RCSB:8v25, PDBe:8v25, PDBj:8v25
PDBsum8v25
PubMed39149911
UniProtP84233|H32_XENLA Histone H3.2

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