Structure of PDB 8jho Chain E Binding Site BS02

Receptor Information
>8jho Chain E (length=117) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARTKQTARKSTGGKAPRKQKPHRYRPGTVALREIRRYQKSTELLIRKLPF
QRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLAAIHAKRV
TIMPKDIQLARRIRGER
Ligand information
>8jho Chain J (length=340) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aatacatgcacaggatgtatatatctgacacgtgcctggagactagggag
taatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaa
gcggtgctagagctgtctacgaccaattgagcggcctcggcaccgggatt
ctccagtctagaactggcagtactttcaatacatgcacaggatgtatata
tctgacacgtgcctggagactagggagtaatccccttggcggttaaaacg
cgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtctacgac
caattgagcggcctcggcaccgggattctcgatatcgaat
Receptor-Ligand Complex Structure
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PDB8jho Structure of histone deacetylase complex Rpd3S bound to nucleosome
Resolution7.6 Å
Binding residue
(original residue number in PDB)		P38 H39 R40 Y41 R42 P43 G44 T45 V46 A47 R63 K64 L65 P66 R69 R83
Binding residue
(residue number reindexed from 1)		P21 H22 R23 Y24 R25 P26 G27 T28 V29 A30 R46 K47 L48 P49 R52 R66
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8jho, PDBe:8jho, PDBj:8jho
PDBsum8jho
PubMed37798513
UniProtP84233|H32_XENLA Histone H3.2

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