Structure of PDB 8hy0 Chain E Binding Site BS02

Receptor Information
>8hy0 Chain E (length=116) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARTKQTARKSTGGKAPRKQPHRYRPGTVALREIRRYQKSTELLIRKLPFQ
RLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLAAIHAKRVT
IMPKDIQLARRIRGER
Ligand information
>8hy0 Chain J (length=170) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aatacatgcacaggatgtatatatctgacacgtgcctggagactagggag
taatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaa
gcggtgctagagctgtctacgaccaattgagcggcctcggcaccgggatt
ctccagtctagaactggcag
Receptor-Ligand Complex Structure
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PDB8hy0 Structure of histone deacetylase complex Rpd3S bound to nucleosome
Resolution3.1 Å
Binding residue
(original residue number in PDB)		R40 P43 G44 V46 A47 K56 R63 K64 L65 P66 R69
Binding residue
(residue number reindexed from 1)		R22 P25 G26 V28 A29 K38 R45 K46 L47 P48 R51
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8hy0, PDBe:8hy0, PDBj:8hy0
PDBsum8hy0
PubMed37798513
UniProtP84233|H32_XENLA Histone H3.2

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