Structure of PDB 8hra Chain E Binding Site BS02
Receptor Information
>8hra Chain E (length=834) Species:
562
(Escherichia coli) [
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KIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYNVFFVDGTRGA
GKTTFINSVVKSLNSVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDK
LKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQ
LDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLES
IRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAER
GYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGM
QDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDF
YTKKYHATSLSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIF
TYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQML
LVGCGSVSIFNQFVTELDREKFEQLISEYVAYMSVGRIESASHWANRCCA
VVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMAS
SLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCI
VPPWSEAQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFY
FNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESL
YHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLF
FLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEW
DYLTKNQQIFQNTITSLNSSTIVGASYDKDTPAR
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
8hra Chain E Residue 1001 [
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Receptor-Ligand Complex Structure
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PDB
8hra
Molecular basis of RADAR anti-phage supramolecular assemblies.
Resolution
3.76 Å
Binding residue
(original residue number in PDB)
N22 D31 I33 G81 K82 T83 T84 D222 R377
Binding residue
(residue number reindexed from 1)
N10 D19 I21 G51 K52 T53 T54 D186 R341
Annotation score
4
External links
PDB
RCSB:8hra
,
PDBe:8hra
,
PDBj:8hra
PDBsum
8hra
PubMed
36764292
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