Structure of PDB 8dej Chain E Binding Site BS02

Receptor Information
>8dej Chain E (length=286) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVE
DAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQ
EVSITRMAVTTKAEAEDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSD
EDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDL
VKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
Ligand information
>8dej Chain N (length=48) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aagagtggcgcgcactcgccagcctgagcatggcgaaaactcctccag
Receptor-Ligand Complex Structure
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PDB8dej Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Resolution2.86 Å
Binding residue
(original residue number in PDB)
T124 M175 G176
Binding residue
(residue number reindexed from 1)
T124 M171 G172
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0043571 maintenance of CRISPR repeat elements

View graph for
Biological Process
External links
PDB RCSB:8dej, PDBe:8dej, PDBj:8dej
PDBsum8dej
PubMed36805026
UniProtQ72WF7

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