Structure of PDB 7pnz Chain E Binding Site BS02

Receptor Information

>7pnz Chain E (length=118) Species: 9606 (Homo sapiens)

PRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRI
SAHSQQHNRGGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVKHPLTQE
LKECEGIVPVPLAEKLYS

Ligand information

• Ligand ID: FES
• InChI: InChI=1S/2Fe.2S
• InChIKey: NIXDOXVAJZFRNF-UHFFFAOYSA-N
• SMILES:
  ACDLabs 10.04: [Fe]1S[Fe]S1
  CACTVS 3.341
  OpenEye OEToolkits 1.5.0: S1[Fe]S[Fe]1
• Formula: Fe2 S2
• Name: FE2/S2 (INORGANIC) CLUSTER
• PDB chain: 7pnz Chain P Residue 201

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7pnz Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
• Resolution: 3.09 Å
• Binding residue (original residue number in PDB): C105 I108
• Binding residue (residue number reindexed from 1): C104 I107
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome
• GO:0005515 protein binding
• GO:0019843 rRNA binding
• GO:0070181 small ribosomal subunit rRNA binding

Biological Process

• GO:0006412 translation
• GO:0032543 mitochondrial translation

Cellular Component

• GO:0005737 cytoplasm
• GO:0005739 mitochondrion
• GO:0005743 mitochondrial inner membrane
• GO:0005763 mitochondrial small ribosomal subunit
• GO:0005840 ribosome
• GO:0015935 small ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:7pnz, PDBe:7pnz, PDBj:7pnz
• PDBsum: 7pnz
• PubMed: 35676484
• UniProt: P82932|RT06_HUMAN Small ribosomal subunit protein bS6m (Gene Name=MRPS6)