Structure of PDB 7kox Chain E Binding Site BS02

Receptor Information
>7kox Chain E (length=386) Species: 562,9606 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EFQRKLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLT
TNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFD
ATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSY
GGWSLDLQMQEADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFT
VTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLT
VFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPD
GGKMPKWTRVILLNWCAWFLILEEVRYIANRFRCQDESEAVCSEWKFAAC
VVDRLCLMAFSVFTIICTIGILMSAPNFVEAVSKDF
Ligand information
Ligand IDEPJ
InChIInChI=1S/C11H13ClN2/c12-11-4-1-7(6-13-11)9-5-8-2-3-10(9)14-8/h1,4,6,8-10,14H,2-3,5H2/t8-,9+,10+/m0/s1
InChIKeyNLPRAJRHRHZCQQ-IVZWLZJFSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Clc1ccc(cn1)[C@H]2C[C@@H]3CC[C@H]2N3
ACDLabs 10.04Clc1ncc(cc1)C3CC2NC3CC2
OpenEye OEToolkits 1.5.0c1cc(ncc1C2CC3CCC2N3)Cl
CACTVS 3.341Clc1ccc(cn1)[CH]2C[CH]3CC[CH]2N3
OpenEye OEToolkits 1.5.0c1cc(ncc1[C@H]2C[C@@H]3CC[C@H]2N3)Cl
FormulaC11 H13 Cl N2
NameEPIBATIDINE;
(2R)-2-(6-CHLOROPYRIDIN-3-YL)-7-AZABICYCLO[2.2.1]HEPTANE
ChEMBLCHEMBL298826
DrugBankDB07720
ZINCZINC000000402872
PDB chain7kox Chain E Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7kox Structure and gating mechanism of the alpha 7 nicotinic acetylcholine receptor.
Resolution2.7 Å
Binding residue
(original residue number in PDB)
Y92 W148 Y187 C190 Y194
Binding residue
(residue number reindexed from 1)
Y92 W148 Y187 C190 Y194
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004888 transmembrane signaling receptor activity
GO:0005216 monoatomic ion channel activity
GO:0005230 extracellular ligand-gated monoatomic ion channel activity
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0022848 acetylcholine-gated monoatomic cation-selective channel activity
GO:0046872 metal ion binding
Biological Process
GO:0006811 monoatomic ion transport
GO:0022900 electron transport chain
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0016020 membrane
GO:0042597 periplasmic space
GO:0045211 postsynaptic membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7kox, PDBe:7kox, PDBj:7kox
PDBsum7kox
PubMed33735609
UniProtP0ABE7|C562_ECOLX Soluble cytochrome b562 (Gene Name=cybC);
P36544|ACHA7_HUMAN Neuronal acetylcholine receptor subunit alpha-7 (Gene Name=CHRNA7)

[Back to BioLiP]