Structure of PDB 6yav Chain E Binding Site BS02

Receptor Information
>6yav Chain E (length=109) Species: 354 (Azotobacter vinelandii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATIYFSSPLMPHNKKVQAVAGKRSTLLGVAQENGVKIPFECQDGNCGSCL
VKITHLDGERIKGMLLTDKERNVLKSVGKLPRDLPPTYRLACQTIVTDED
LLVEFTGEP
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6yav Chain E Residue 203 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6yav Structure of FeSII (Shethna) protein from Azotobacter vinelandii
Resolution1.65 Å
Binding residue
(original residue number in PDB)		S8 M11
Binding residue
(residue number reindexed from 1)		S7 M10
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:0009399 nitrogen fixation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6yav, PDBe:6yav, PDBj:6yav
PDBsum6yav
PubMed
UniProtQ44501|FESII_AZOVI Protein FeSII (Gene Name=fesII)

[Back to BioLiP]