Structure of PDB 6rlp Chain E Binding Site BS02

Receptor Information

>6rlp Chain E (length=153) Species: 12242 (Tobacco mosaic virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSE
VWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQA
NPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGL
VWT

Ligand information

>6rlp Chain p (length=3) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gaa

...

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6rlp Cryo-EM reconstruction of TMV coat protein
Resolution	2.3 Å
Binding residue (original residue number in PDB)	Q34 T37 Q38 Q39 E95
Binding residue (residue number reindexed from 1)	Q34 T37 Q38 Q39 E95

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005198	structural molecule activity
GO:0042802	identical protein binding

	Cellular Component
GO:0019028	viral capsid
GO:0019029	helical viral capsid

View graph for
Molecular Function

View graph for
Cellular Component

External links

PDB	RCSB:6rlp, PDBe:6rlp, PDBj:6rlp
PDBsum	6rlp
PubMed	31205015
UniProt	P69687\|CAPSD_TMV Capsid protein (Gene Name=CP)

[Back to BioLiP]