Structure of PDB 6g4r Chain E Binding Site BS02

Receptor Information
>6g4r Chain E (length=310) Species: 1718 (Corynebacterium glutamicum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EYRPTLAQLRTFVTIAECKHFGTAATKLSISQPSLSQALVALETGLGVQL
IERSTRKVIVTPAGEKLLPFAKSTLDAAESFLSHAKGANGSLTGPLTVGI
IPTAAPYILPSMLSIVDEEYPDLEPHIVEDQTKHLLALLRDGAIDVAMMA
LPSEAPGMKEIPLYDEDFIVVTASDHPFAGRQDLELSALEDLDLLLLDDG
HSLHDQIVDLCRRGDINAVTRASSLTTVMQLVVAGLGSTLVPISAIPWEC
TRPGLATANFNSDVTANRRIGLVYRSSSSRAEEFEQFALILQRAFQEAVA
LAASTGITLK
Ligand information
Ligand IDPEO
InChIInChI=1S/H2O2/c1-2/h1-2H
InChIKeyMHAJPDPJQMAIIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01
CACTVS 3.385
OpenEye OEToolkits 2.0.7
OO
FormulaH2 O2
NameHYDROGEN PEROXIDE
ChEMBLCHEMBL71595
DrugBankDB11091
ZINC
PDB chain6g4r Chain E Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6g4r Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing.
Resolution2.62 Å
Binding residue
(original residue number in PDB)
L207 I211
Binding residue
(residue number reindexed from 1)
L203 I207
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0032993 protein-DNA complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6g4r, PDBe:6g4r, PDBj:6g4r
PDBsum6g4r
PubMed30463959
UniProtQ8NP91

[Back to BioLiP]