Structure of PDB 6b1t Chain E Binding Site BS02

Receptor Information

>6b1t Chain E (length=914) Species: 28285 (Human adenovirus 5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ATPSMMPQWSYMHISGQDASEYLSPGLVQFARATETYFSLNNKFRNPTVA
PTHDVTTDRSQRLTLRFIPVDREDTAYSYKARFTLAVGDNRVLDMASTYF
DIRGVLDRGPTFKPYSGTAYNALAPKGAPNPCEWDEAQKTHVFGQAPYSG
INITKEGIQIGVEGQTPKYADKTFQPEPQIGESQWYETEINHAAGRVLKK
TTPMKPCYGSYAKPTNENGGQGILVKQLESQVEMQFFSTTEATNLTPKVV
LYSEDVDIETPDTHISYMPTIKEGNSRELMGQQSMPNRPNYIAFRDNFIG
LMYYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQLLLDSIGDRTRYFS
MWNQAVDSYDPDVRIIENHGTEDELPNYCFPLGGVINTETLTKVKPKTNG
WEKDATEFSDKNEIRVGNNFAMEINLNANLWRNFLYSNIALYLPDKLKYS
PSNVKISDNPNTYDYMNKRVVAPGLVDCYINLGARWSLDYMDNVNPFNHH
RNAGLRYRSMLLGNGRYVPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKD
VNMVLQSSLGNDLRVDGASIKFDSICLYATFFPMAHNTASTLEAMLRNDT
NDQSFNDYLSAANMLYPIPANATNVPISIPSRNWAAFRGWAFTRLKTKET
PSLGSGYDPYYTYSGSIPYLDGTFYLNHTFKKVAITFDSSVSWPGNDRLL
TPNEFEIKRSVDGEGYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPESYK
DRMYSFFRNFQPMSRQVVDDTKYKDYQQVGILHQHNNSGFVGYLAPTMRE
GQAYPANFPYPLIGKTAVDSITQKKFLCDRTLWRIPFSSNFMSMGALTDL
GQNLLYANSAHALDMTFEVDPMDEPTLLYVLFEVFDVVRVHRPHRGVIET
VYLRTPFSAGNATT

Ligand information

>6b1t Chain W (length=11) Species: 28285 (Human adenovirus 5) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

GLRFPSKMFGG

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6b1t Atomic Structures of Minor Proteins VI and VII in Human Adenovirus.
Resolution	3.2 Å
Binding residue (original residue number in PDB)	A20 E36 N42 R46 N47 T49
Binding residue (residue number reindexed from 1)	A19 E35 N41 R45 N46 T48

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005198	structural molecule activity

	Biological Process
GO:0046718	symbiont entry into host cell
GO:0075521	microtubule-dependent intracellular transport of viral material towards nucleus

	Cellular Component
GO:0019028	viral capsid
GO:0039623	T=25 icosahedral viral capsid
GO:0042025	host cell nucleus
GO:0043657	host cell

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:6b1t, PDBe:6b1t, PDBj:6b1t
PDBsum	6b1t
PubMed	28978703
UniProt	P04133\|CAPSH_ADE05 Hexon protein (Gene Name=L3)

[Back to BioLiP]