Structure of PDB 5xfp Chain E Binding Site BS02

Receptor Information
>5xfp Chain E (length=300) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDIS
PAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPSWV
CRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQ
QSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECC
VCRGGPEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENW
DSLLLGELSDTPKGERSSRLLSALNSHKDRFISGRECLFGLHARMPPPVE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5xfp Chain E Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5xfp Polycomb-like proteins link the PRC2 complex to CpG islands
Resolution2.3 Å
Binding residue
(original residue number in PDB)
C189 C191 H212 C215
Binding residue
(residue number reindexed from 1)
C154 C156 H177 C180
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5xfp, PDBe:5xfp, PDBj:5xfp
PDBsum5xfp
PubMed28869966
UniProtO43189|PHF1_HUMAN PHD finger protein 1 (Gene Name=PHF1)

[Back to BioLiP]