Structure of PDB 1zg5 Chain E Binding Site BS02
Receptor Information
>1zg5 Chain E (length=67) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMK
LKSRVEAAVWVHQERIF
Ligand information
>1zg5 Chain H (length=20) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgtacccctataggggtacg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1zg5
Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
T157 R159 I182 T183 S185 T186 V189 H190
Binding residue
(residue number reindexed from 1)
T8 R10 I33 T34 S36 T37 V40 H41
Binding affinity
PDBbind-CN
: Kd=0.38uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1zg5
,
PDBe:1zg5
,
PDBj:1zg5
PDBsum
1zg5
PubMed
16262254
UniProt
P0AF28
|NARL_ECOLI Nitrate/nitrite response regulator protein NarL (Gene Name=narL)
[
Back to BioLiP
]