Structure of PDB 4v63 Chain DQ Binding Site BS02

Receptor Information
>4v63 Chain DQ (length=136) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RMKYRKQQRGRLKGATKGGDYVAFGDFGLVALEPAWITAQQIEAARVAMV
RHFRRGGKIFIRIFPDKPYTKKPLEVRMGKGKGNVEGYVAVVKPGRVMFE
VAGVTEEQAMEALRIAGHKLPIKTKIVRRDAYDEAQ
Ligand information
>4v63 Chain DB (length=119) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucccccgugcccauagcggcguggaaccacccguucccauuccgaacacg
gaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccuggga
gaguaggucggugcggggg
.<<<<<<<<<<....<<<<<<<<....<<<<<<<.............>>>
>..>>>...>>>>>>.>><<<.....<.<<<<<<<<....>>>>>>>>..
.>...>>>.>>>>>>>>>>
Receptor-Ligand Complex Structure
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PDB4v63 Structural basis for translation termination on the 70S ribosome
Resolution3.207 Å
Binding residue
(original residue number in PDB)		R16 L17 T21
Binding residue
(residue number reindexed from 1)		R11 L12 T16
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v63, PDBe:4v63, PDBj:4v63
PDBsum4v63
PubMed18596689
UniProtQ72I11|RL16_THET2 Large ribosomal subunit protein uL16 (Gene Name=rplP)

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