Structure of PDB 6tt9 Chain DDD Binding Site BS02

Receptor Information
>6tt9 Chain DDD (length=228) Species: 33129 (Phaseolus acutifolius) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NDISFNFQRFNETNLILQGDASVSSSGQLRLTNLNDNGEPTLSSLGRAFY
STPIQIWDSTTGAVASFATSFTFNIRVPNNAGPADGLAFALVPVGSKPKD
RGGLLGLFDKAHTVAVEFDTLYNRDWDPRERHIGIDVNSIKSIKTTPWDF
VNGEDAEVLITYDSSTKLLVASLVYPSQKTSFIVSDTVDLKSVLPEWVSV
GFSATSGISKGNVETNDLLSWSFASKLS
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6tt9 Chain DDD Residue 308 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6tt9 Recombinant Lectin from Tepary Bean (Phaseolus acutifolius) with Specific Recognition for Cancer-Associated Glycans: Production, Structural Characterization, and Target Identification.
Resolution1.9 Å
Binding residue
(original residue number in PDB)
E124 D126 D134 H139
Binding residue
(residue number reindexed from 1)
E117 D119 D127 H132
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:6tt9, PDBe:6tt9, PDBj:6tt9
PDBsum6tt9
PubMed32340396
UniProtQ40750

[Back to BioLiP]