Structure of PDB 9ggq Chain D Binding Site BS02

Receptor Information

>9ggq Chain D (length=776) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKE
IIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLGVSVVNALSQ
KLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTN
VTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEY
LNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDG
GTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVP
DPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDA
ARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSA
GGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
GRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVY
IAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGE
ALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTR
WVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLD
HEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVK
ESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFT
TLMGDAVEPRRAFIEENALKAANIDI

Ligand information

>9ggq Chain H (length=22) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gattttatgcctgattctgttt

Receptor-Ligand Complex Structure

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Structure summary

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PDB	9ggq Structural basis of chiral wrap and T-segment capture by Escherichia coli DNA gyrase
Resolution	2.6 Å
Binding residue (original residue number in PDB)	N452 H505 R788
Binding residue (residue number reindexed from 1)	N424 H477 R760

External links

PDB	RCSB:9ggq, PDBe:9ggq, PDBj:9ggq
PDBsum	9ggq
PubMed
UniProt	P0AES6\|GYRB_ECOLI DNA gyrase subunit B (Gene Name=gyrB)

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