Structure of PDB 8tcr Chain D Binding Site BS02

Receptor Information
>8tcr Chain D (length=270) Species: 239759 (Alistipes) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKDIGIQLYSVRDLIGSFGRNQHDYKPVLKALADMGYTSIEAASYNDGKF
YGNTPEEFRRDVEAVGMKVLSSHCGKGLSDEELASGDFSESMKWWDQCIA
AHKAAGMEYIVTPYLPVPKTLKEMQTYCDYLNAIGKKCREAGIKYGYHNH
AHEFQKIEDKAVMLDYMIENTDPENLFIELDVYWAVMGKASPVDYFHKYP
GRFKMLHIKDRREIGQSGMVGFDAIFENAKTAGVENIIVEVEQYSYDVEK
SVKLSLDYLLEAPFVKASYS
Ligand information
Ligand IDGLC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-DVKNGEFBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-glucopyranose;
alpha-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL423707
DrugBank
ZINCZINC000003861213
PDB chain8tcr Chain D Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8tcr An alternative broad-specificity pathway for glycan breakdown in bacteria
Resolution2.08 Å
Binding residue
(original residue number in PDB)		Y39 H103 H180 E270 E272
Binding residue
(residue number reindexed from 1)		Y9 H73 H150 E240 E242
Annotation score4
Gene Ontology
Molecular Function
GO:0016853 isomerase activity

View graph for
Molecular Function
External links
PDB RCSB:8tcr, PDBe:8tcr, PDBj:8tcr
PDBsum8tcr
PubMed38898276
UniProtA0A9P3ZKE6

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