Structure of PDB 8s9v Chain D Binding Site BS02

Receptor Information
>8s9v Chain D (length=518) Species: 1148 (Synechocystis sp. PCC 6803) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARKVTTRWKITGTLIAETPLHIGGVGGDADTDLALAVNGAGEYYVPGTSL
AGALRGWMTQLLNNDESQIKDLWGDHLDAKRGASFVIVDDAVIHIPNNAD
VEIREGVGIDRHFGTAANGFKYSRAVIPKGSKFKLPLTFDSQDDGLPNAL
IQLLCALEAGDIRLGAAKTRGLGRIKLDDLKLKSFALDKPEGIFSALLDQ
GKKLDWNQLKANVTYQSPPYLGISITWNPKDPVMVKAEGDGLAIDILPLV
SQVGSDVRFVIPGSSIKGILRTQAERIIRTICQSNGSEKNFLEQLRINLV
NELFGSASLSQKQNGKDIDLGKIGALAVNDCFSSLSMTPDQWKAVENATE
MTGNLQPALKQATGYPNNISQAYKVLQPAMHVAVDRWTGGAAEGMLYSVL
EPIGVTWEPIQVHLDIARLKNYYHGKEEKLKPAIALLLLVLRDLANKKIP
VGYGTNRGMGTITVSQITLNGKALPTELEPLNKTMTCPNLTDLDEAFRQD
LSTAWKEWIADPIDLCQQ
Ligand information
>8s9v Chain G (length=34) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uauugacgaccccgauugguucuacuacaguuuc
..................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8s9v RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		D33 H77 N119 G120 F121 K122 Y123 D246 L293 S309 L310 S311 E394 G395 L397 Y398
Binding residue
(residue number reindexed from 1)		D32 H76 N118 G119 F120 K121 Y122 D245 L292 S308 L309 S310 E393 G394 L396 Y397
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

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Molecular Function
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Biological Process
External links
PDB RCSB:8s9v, PDBe:8s9v, PDBj:8s9v
PDBsum8s9v
PubMed38637512
UniProtQ6ZED3

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