Structure of PDB 8s3d Chain D Binding Site BS02

Receptor Information
>8s3d Chain D (length=412) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMNALVATNRNFQRASRILGLDSKLEKSLLIPYREIKVECTIPKDDGSLV
SYVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVVDIPYG
GAKGGIGCNPKDLSISELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQT
MAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVVFATEALFAE
YGKSISDMTFAIQGFGNVGTWAAKAIFERGGKVVAVSDINGAISNPNGID
IAALLKHKAGNGSLKDFSGGDAMNPNDLLVHDCDVLIPCALGGVLNKENA
NDVKAKFIIEAANHPTDPDADEILSKKGVIILPDVYANAGGVTVSYFEWV
QNIQGFMWDEEKVNQELKRYMTKAFNDIKANCKTHNCDLRMGAFTLGLNR
VARATLLRGWEA
Ligand information
Ligand ID8GL
InChIInChI=1S/C5H9NO5/c6-5(11,4(9)10)2-1-3(7)8/h11H,1-2,6H2,(H,7,8)(H,9,10)/t5-/m0/s1
InChIKeyGXSDWXSYZHGBBO-YFKPBYRVSA-N
SMILES
SoftwareSMILES
CACTVS 3.385N[C](O)(CCC(O)=O)C(O)=O
CACTVS 3.385N[C@](O)(CCC(O)=O)C(O)=O
OpenEye OEToolkits 2.0.6C(CC(C(=O)O)(N)O)C(=O)O
OpenEye OEToolkits 2.0.6C(C[C@](C(=O)O)(N)O)C(=O)O
FormulaC5 H9 N O5
Name(2S)-2-azanyl-2-oxidanyl-pentanedioic acid
ChEMBL
DrugBank
ZINC
PDB chain8s3d Chain D Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8s3d Legume-type glutamate dehydrogenase: Structure, activity, and inhibition studies.
Resolution1.65 Å
Binding residue
(original residue number in PDB)		K66 G68 M87 K90 K102 A140 R181 V341 S344
Binding residue
(residue number reindexed from 1)		K67 G69 M88 K91 K103 A141 R182 V342 S345
Annotation score1
External links