Structure of PDB 8q4d Chain D Binding Site BS02
Receptor Information
>8q4d Chain D (length=373) Species:
1422
(Geobacillus stearothermophilus) [
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MITRGEFFMIKEMYERGMSISDIARELGIDRKTVRKYIHSPNPPSKSKRK
QRKSKLDPFKPYLQKRMLEDGVFNSEKLFFEIRQQGYTGGKTILKDYMKP
FRETAKKKYTVRYETLPGEQMQVDWKEVGEVVIEGKKVKLSLFVATLGYS
RMKYAVFTTSQDQEHLMECLIQSFKYFGGVPKKVLFDNMKTVTDGREQGV
VKWNQRFSEFASYYGFIPKVCRPYRAQTKGKVERAIQYIMDHFYVGTAFE
SIEELNFLLHRWLDQVANRKPNATTGISPQERWAEESLKPLPLKDYDTSY
LSYRKVHWDGSFSYKGEQWLLSAEYAGKEILVKERLNGDIRLYFRGEEIS
HVDQQKKVISFAEKIKKKQTEMA
Ligand information
>8q4d Chain b (length=58) [
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tcatgtcaaggccgattattttttccccaaaatcgccggtttaaaattcc
ccagaagg
Receptor-Ligand Complex Structure
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PDB
8q4d
Molecular basis for transposase activation by a dedicated AAA+ ATPase.
Resolution
3.62 Å
Binding residue
(original residue number in PDB)
D30 K50 R52 S75 E76 T92 K95 D96 K99 R102 R225 D309
Binding residue
(residue number reindexed from 1)
D30 K50 R52 S75 E76 T92 K95 D96 K99 R102 R225 D309
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006310
DNA recombination
GO:0032196
transposition
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Molecular Function
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Biological Process
External links
PDB
RCSB:8q4d
,
PDBe:8q4d
,
PDBj:8q4d
PDBsum
8q4d
PubMed
38926614
UniProt
Q45618
|TRA6_GEOSE Putative transposase for insertion sequence element IS5376
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