Structure of PDB 8pml Chain D Binding Site BS02

Receptor Information
>8pml Chain D (length=402) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SAAYFLWPTSNLQHCAAEGRANYFGNLQKGLLPRHPGRLPKGQQANSLLD
LMTIRAFHSKILRRFSLGTAVGFRIRKGDLTDIPAILVFVARKVHKKWLN
PAQCLPAILEGPGGVWCDVDVVEFSYEQMFSELVDKLCGSDECIGSGSQV
ASHETFGTLGAIVKRRTGNKQVGFLTNHHVAVDLDYPNQKMFHPLPPNLG
PGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFADDFDIST
VTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTTGTVMAYAL
EYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII
WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQDAVQ
QQ
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8pml Chain D Residue 1002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8pml The catalytic triad of rice NARROW LEAF1 involves H234
Resolution2.95 Å
Binding residue
(original residue number in PDB)		I123 D168
Binding residue
(residue number reindexed from 1)		I75 D120
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:8pml, PDBe:8pml, PDBj:8pml
PDBsum8pml
PubMed38600265
UniProtB4XT64|NAL1_ORYSJ Protein NARROW LEAF 1 (Gene Name=NAL1)

[Back to BioLiP]