Structure of PDB 8grj Chain D Binding Site BS02

Receptor Information
>8grj Chain D (length=531) Species: 292 (Burkholderia cepacia) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADVVVVGSGVAGAIVAHQLAMAGKAVILLEAGPRMPRWEIVERFRNQPDK
MDFMAPYPSSPWAPHPEYGPPNDYLILKGEHKFNSQYIRAVGGTTWHWAA
SAWRFIPNDFKMKSVYGVGRDWPIQYDDLEPYYQRAEEELGVWGPGPEED
LYSPRKQPYPMPPLPLSFNEQTIKTALNNYDPKFHVVTEPVARNSRPYDG
RPTCCGNNNCMPICPIGAMYNGIVHVEKAERAGAKLIENAVVYKLETGPD
KRIVAALYKDKTGAEHRVEGKYFVLAANGIETPKILLMSANRDFPNGVAN
SSDMVGRNLMDHPGTGVSFYASEKLWPGRGPQEMTSLIGFRDGPFRATEA
AKKIHLSNLSRIDQETQKIFKAGKLMKPDELDAQIRDRSARYVQFDCFHE
ILPQPENRIVPSKTATDAIGIPRPEITYAIDDYVKRGAAHTREVYATAAK
VLGGTDVVFNDEFAPNNHITGSTIMGADARDSVVDKDCRTFDHPNLFISS
SATMPTVGTVNVTLTIAALALRMSDTLKKEV
Ligand information
Ligand IDF3S
InChIInChI=1S/3Fe.4S
InChIKeyFCXHZBQOKRZXKS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385S1[Fe]S[Fe]2S[Fe]1S2
OpenEye OEToolkits 2.0.7S1[Fe]2S[Fe]3[S]2[Fe]1S3
FormulaFe3 S4
NameFE3-S4 CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain8grj Chain D Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8grj X-ray structure of the direct electron transfer-type FAD glucose dehydrogenase catalytic subunit complexed with a hitchhiker protein.
Resolution2.95 Å
Binding residue
(original residue number in PDB)		C212 C213 G214 N215 N216 N217 C218 C222 P223 A226 M227 G338 P339
Binding residue
(residue number reindexed from 1)		C204 C205 G206 N207 N208 N209 C210 C214 P215 A218 M219 G330 P331
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0046872 metal ion binding
GO:0050660 flavin adenine dinucleotide binding
GO:0051538 3 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:8grj, PDBe:8grj, PDBj:8grj
PDBsum8grj
PubMed
UniProtQ8GQE7

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