Structure of PDB 8f22 Chain D Binding Site BS02

Receptor Information
>8f22 Chain D (length=205) Species: 11698 (Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PIVQNGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDL
NTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVGQMREPRGSDIAGTTS
TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKE
PFRDYVDRFYKTLRAEQASQATETLLVQNANPDCKTILKALGPGATLEEM
MTACQ
Ligand information
Ligand IDXBQ
InChIInChI=1S/C29H33N5O6S/c1-32(23-10-12-24(40-2)13-11-23)29(37)26(18-21-6-4-3-5-7-21)31-27(35)19-33-16-17-34(20-28(33)36)41(38,39)25-14-8-22(30)9-15-25/h3-15,26H,16-20,30H2,1-2H3,(H,31,35)/t26-/m0/s1
InChIKeyREXBCEZWZOLFMN-SANMLTNESA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CN(c1ccc(cc1)OC)C(=O)[C@H](Cc2ccccc2)NC(=O)CN3CCN(CC3=O)S(=O)(=O)c4ccc(cc4)N
CACTVS 3.385COc1ccc(cc1)N(C)C(=O)[C@H](Cc2ccccc2)NC(=O)CN3CCN(CC3=O)[S](=O)(=O)c4ccc(N)cc4
OpenEye OEToolkits 2.0.7CN(c1ccc(cc1)OC)C(=O)C(Cc2ccccc2)NC(=O)CN3CCN(CC3=O)S(=O)(=O)c4ccc(cc4)N
CACTVS 3.385COc1ccc(cc1)N(C)C(=O)[CH](Cc2ccccc2)NC(=O)CN3CCN(CC3=O)[S](=O)(=O)c4ccc(N)cc4
ACDLabs 12.01O=S(=O)(c1ccc(N)cc1)N1CC(=O)N(CC(=O)NC(Cc2ccccc2)C(=O)N(C)c2ccc(OC)cc2)CC1
FormulaC29 H33 N5 O6 S
NameNalpha-{[4-(4-aminobenzene-1-sulfonyl)-2-oxopiperazin-1-yl]acetyl}-N-(4-methoxyphenyl)-N-methyl-L-phenylalaninamide
ChEMBLCHEMBL4471665
DrugBank
ZINC
PDB chain8f22 Chain E Residue 300 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8f22 Structure of a benzosulfonamide based inhibitor - bound to a disulfide stabilised HIV-1 capsid hexamer
Resolution2.5 Å
Binding residue
(original residue number in PDB)
Y169 L172 R173
Binding residue
(residue number reindexed from 1)
Y160 L163 R164
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.13.2: exoribonuclease H.
3.1.26.13: retroviral ribonuclease H.
3.4.23.16: HIV-1 retropepsin.
Gene Ontology

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Biological Process
External links
PDB RCSB:8f22, PDBe:8f22, PDBj:8f22
PDBsum8f22
PubMed
UniProtP12497|POL_HV1N5 Gag-Pol polyprotein (Gene Name=gag-pol)

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